FUNDAMENTALS OF BIOLOGY I LECTURE SYLLABUS
  FALL  2009

DR. SUSAN PETRO


OFFICE : G322         EXTENSION : 7038       E-MAIL :  spetro@ramapo.edu
I read and answer my email during regular business hours - M-F 8:30-4:30

WEB ADDRESS :  http://phobos.ramapo.edu/~spetro

OFFICE HRS : MONDAY 2:30-3:30,  TUESDAY 2:30-3:30 and FRIDAY 2:30-3:30
AND BY APPOINTMENT

This syllabus is not set in stone, I may need to add or delete material as necessary.  Keep the syllabus bookmarked on your computer so you have the most current information always available.

COURSE OBJECTIVES / TEXT / SCHEDULE / GRADING / QUIZZES / EXAMINATIONS / DISABILITY ACCOMMODATIONS / HELP

Fundamentals of Biology I is an introduction to the principles of biology. It lays the foundation for all the biology courses that follow it. This first semester of a two semester sequence will cover three major topics - 1) the chemical composition, structure and function of the cell, 2) genetics and evolution, and 3) the diversity of living organisms.

TEXT:  Three ring binder edition of BIOLOGY by Campbell and Reese et al, 8th edition printed especially for Ramapo College ISBN # 0558247350
                     Available at the Campus Bookstore and much less expensive than the hard bound edition

        WEBSITEPurchase of the textbook allows you access to the publisher's website. See the page prior to the title page in your
                              textbook for your Activation ID and Password. Click here for directions to set up your account .  The course
                              password is RamapoBIOL110.  All the recommended activities are in Study Area.  Choose the chapter you
                              want and  then click on the link to the recommended activity.  See links under the Chapters heading
                              below for a brief  review of the activities for that chapter.  A red star red star means there is a highly recommended
                              activity.  The website also has a self quiz, activities quiz and practice exam at the bottom of the
                             activity page for each chapter in addition to those under the Sample Quiz heading below.

       MOODLE:  This course has a Moodle site.  Go to the Ramapo Home page and click on the Moodle link beneath the
                               My Ramapo/Luminis button.  Click on the Lecture Handouts icon for the handouts for each lecture. 
                               Prior to each lecture print out that day's lecture handouts and
bring them to class with you.  Your
                               lecture grades will be posted on Moodle as well.

  Class Policies: Cell phones must be turned off in class and kept in a pocket, backpack or purse.
                                Earphones are to be removed from ears and put away until after class.
                               
Laptop computers may be used to take notes in class, but you must send me a copy
                                of  your class notes by email immediately after each class if you use one.   
 

DATE
CHAPTERS
SAMPLE QUIZ
WEB LINKS
September 2
Chapter 1 - Introduction1 
(p.1-5 and 18-23 up to Theories in Science )
red star Textbook website activity review
bluedot Sample quiz on the scientific method and the criteria of life
Please fill out the class survey, print it and hand it in  at first class.                                                       
blue dot Class Survey
Blue dot
Movement in plants
September 9
                        
Chapter 2 - The Chemical Context of Life
red starTextbook website activity review
blue button Sample quiz on  basic chemistry
blue dot Vocabulary List

September 14
Chapter 3 -  Water and the Fitness of the Environment
Chapter 4 - Carbon and the Molecular Diversity of Life
(Omit material on buffers and acid precipitation
(p.54-56)
red starTextbook website activity review
Blue dot
Sample quiz on water and basic carbon chemistry

Blue dot Hydrogen bond formation animation
Blue dot Sweating cicada
Blue dot
pH is important for creatures both great and small
September  16
Chapter  5 - The Structure and Function of Large Biological Molecules
Textbook website activity review

On reserve at the circulation desk of  the library is a good review video: Basic Chemistry for Biology Students 
Call Number -  Other PETRO P-0
blue dot Sample quiz  on biological macromolecules

Blue dot Macromolecule problems
Omit 11 and 12
Blue dot Triglyceride formation animation
blue dot Interesting article on toad toxins (steroids) and snakes
September  21
Chapter 8 - Introduction to Metabolism
Omit formulas on p.146
Pages 149-151 will be covered with chapter 9.
blue dot Sample quiz on metabolism


September  23
Chapter 6 - A Tour of the Cell
Material on 
p.118-122 will be covered in the next lecture
blue dot Sample quiz
on cellular organelles
bluedot Matching game to quiz yourself on organelles
blue dot Flash card quiz
blue dot Animal  and plant cell web site - click on appropriate cell type under Interactive in left column of site 
blue dot Amoeboid movement
Blue dot Paramecium cilia beating
blue dot Cytoplasmic streaming
Click on the link under the 4th photograph down on the page
September  28 Chapter 7 - Membrane Structure and Function
red starTextbook website activity review

This chapter will be on Exam 2
blue dot Sample quiz on
membranes and methods of transport across them

blue dot Construct a cell membrane activity

September  30 Examination 1
Chapters 1 - 6, 8 (excluding pages 149-151)
Study Hint:
You do not really understand something unless you can explain it to your grandmother.

- Albert Einstein

blue dot Sample examination
Blue dot
Study Hints for Exams

Bllue dot Review sheet for first examination
Blue dot
I studied hard and knew all the material so why did I do poorly on the exam?
October 5
 Chapter 8  -  An Introduction to Metabolism
Pages 149-151
Chapter 9  - Cellular Respiration
(Omit p.177-179 the material on fermentation will be covered in lab.)
You do not need to know the individual steps of glycolysis on  p.168-169.
red starTextbook website activity review
blue dot Sample quiz on cellular respiration

Videos on reserve in library on
Krebs Cycle and Oxidative Phosphorylation
Call number is:
QH 633 C39 1992
October 7
Chapter 12  - The Cell Cycle
Omit p.238-243
red starTextbook website activity review

  Chapter 13 - Meiosis and Sexual Life Cycles
red starTextbook website activity review
blue dot Sample quiz on mitosis and meiosis




blue dot Vocabulary List
Blue dot Animation of the cell cycle
blue dot A site for mitosis
blue dot Mitosis/Meiosis activity
blue dot Meiosis activity
Blue dot
Regeneration in the sea squirt
October 12
Chapter 14 -  Mendel and the Gene Idea
Omit p. 269-270.and pl 280-281
CD/textbook website activity review

Video on Mendelian genetics explaining simple dominance using monohybrid and dihybrid crosses is on reserve in the library at the circulation desk -
call # QH31 M45 G81

blue dot Sample quiz for 1st lecture on heredity
Good matching quiz
blue dot
Monohybrid cross
blue dot
Dihybrid cross
blue dot
Incomplete dominance
blue dot
Monohybrid cross problems
blue dot Genetics Vocabulary List
October 14
Chapter 15  - The Chromosomal Basis of Inheritance
Omit p.292-302

CD/textbook website activity review
bluedot Sample quiz for 2nd lecture on heredity
blue dot Genetics Problems
blue dot Answers to Genetics Problems
blue dot Excellent genetics problems tutorial (omit trihybrid cross)
Blue dot Additional genetics problems
Omit crossing over problems
blue dot Sex-linked problems
blue dot
Sex determination by egg size in some lizards
Blue dot
Effect of global warming on sea turtle sex ratios
October 19
Chapter 22 - Descent with Modification 
Chapter 23 - Evolution of Populations

  red starTextbook website activity review
blue dot Sample quiz on evolution and the Hardy-Weinberg Equilibrium
blue dot
Whale evolution article
blue dot
Hardy-Weinberg conditions animation
blue dot Excellent Hardy-Weinberg Tutorial
blue dot Vocabulary List
October 21

       firefly
        Firefly flash patterns
        (Example of
        behavioral isolation)


Chapter 24 - The Origin of Species
Omit p.498-501

  red starTextbook website activity review
blue dot Sample quiz on  speciation


Blue dot Behavioral isolation of the plains leopard frog and the Chiricahua leopard frog by  song
fiddler crab
Male fiddler crab dances
(Example of behavioral isolation)

October 26
Examination 2
Chapters 7, 8 (pages 149-151), 9, 12-15, 22-23
Membrane Structure and Function
Introduction to Metabolism, Cellular Respiration, Mitosis/Meiosis, Genetics, and Evolution and material from previous exam.
Note: Chapter 24 will not be covered on this examN
blue dot Sample examination 2 - new material
blue dot Review sheet of new material for examination 2

October 28
Last day to withdraw

October 28

 




Chapter 26 - Phylogeny  and the Tree of Life
Omit Concepts 26.4 and 26.5
red starTextbook website activity review
Chapter 27 - Bacteria and Archaea
Omit p.561-563 and p. 570-573
red starTextbook website activity review
blue dot Sample quiz on phylogeny
blue dot Sample quiz on prokaryota
Blue dot
Species naming as a fundraiser
Blue dot
Burp vaccine for cattle
blue dot Archaea -web site
blue dot Cyanobacteria web site
November 2
Chapter 25 - The History of Life on Earth Read The First Eukaryotes section on pages 516-517
Chapter 28 - Protists
Omit Diplomonads and Parabasalids
p. 580 also omit Concepts 28.4 The Rhizarians and Concept 28.6 The Unikonts
red starTextbook website activity review
blue dot Sample quiz on Protista

blue dot Malaria - Play the Parasite game (Play the Mosquito game doesn't work properly)
Blue dot
Dinoflagellate eyes
Blue dot Protist Powerpoint presentation from lecture  - Password needed

November 4

Chapter 29 - Plant Diversity I: How Plants Colonized Land
Omit column 2 of p.612 beginning with Evolution of Leaves
red starTextbook website activity review

blue dot Sample quiz on seedless plants


November 9
     sunflower with bee
Chapter 30 - Plant Diversity II: The  Evolution of Seed Plants
red starTextbook website activity review
blue dot Sample quiz on seed plants
Blue dot
Pollination Powerpoint presentation from lecture - Password needed
blue button
Parts of a Flower Quiz
blue dot
Guess the pollinator activity
November 11

Chapter 31 - Fungi
red starTextbook website activity review


blue dot Sample quiz on fungi


blue dot
Video clips of nematode-trapping fungi
blue dot
Web site on termite-fungus mutualism
blue dot
Fast fungi
Blue dot
Largest organism
Blue dot
White nose in bats
Blue dot
Fungal parasite of ants
Blue dot Simple review exercise of fungus kingdom (omits Glomeromycota)
November 16

    sponges
Chapter 32 - An Introduction to Animal Diversity
Omit Concept 32.2
red starTextbook website activity review
Chapter 33  - Invertebrates:
  As far as we get in class
Textbook website activity review
blue dot Sample quiz on acoelomate animals
Blue dot
Wedding shrimp
Blue dot
Glass sponge fiber optic spicules
Blue dot
Urban tapeworms
November 18
Examination III
Chapters  Chapters  24-33 omitting any pages as per above
Origin of species through as far as we get in lecture on the animal kingdom
and material from previous exams
Blue dot
Sample examination 3 - new material

Blue dot Review sheet of new material for Examination 3

November 23
   octopus
Chapter 33 - Invertebrates:
Pages 670-680
  Omit Rotifers, Lophophorates  on
p. 676-677
Textbook website activity review
Blue dot Sample quiz on protostomes
blue dot Zombie snails
blue dot Example of host behavior manipulation by a parasitic worm
blue dot Video of  behavior discussed above - Click on supplementary video 1
blue dot Solar-powered sea slug
Blue dot Octopus intelligence video
November 25-November 29 Thanksgiving Break Turkey roast pie
November 30
     spider
Chapter 33 - Invertebrates:
Pages 680-692
(Omit Nematodes on
p. 683-656 and Insect Diversity on p. 690-691)
Textbook website activity review
            
             worm
Medicinal leech video Medicinal Leech video
Blue dot
Glowing polychaetes

Week of December 1 - time to be announced Makeup Examination
Material covered by the first three exams
Use review sheets from first three exams
December 2

starfish
Chapter 33  - Invertebrates:
Pages 693-694
Textbook website activity review
Chapter 34 - Vertebrates
Pages 698-700
Rest of 34 covered by Museum Trip
Textbook website activity review
blue dot Sample quiz on deuterostome
Blue dot Sea cucumber expels insides video
December 7
Chapter 16 - The Molecular Basis of Inheritance
Entire chapter
red starTextbook website activity review
blue dot Sample quiz on DNA
Blue dot Computer game on replication of DNA molecule
Blue dot
Initial discovery of DNA

December 9
Chapter 17 - From Gene to Protein
Entire chapter
Textbook website activity review
blue dot Sample quiz on protein synthesis
blue dot Sample 
multiple choice quiz on eukaryotic  gene regulation

blue dot Nice animation of transcription
blue dot Transcription/translation activity

December 14
Chapter 18 - Regulation of Gene Expression
    Omit pages 366 column 2 - 377
red star Textbook website activity review




  
Blue dot DNA methylation stores memories


December 15
Reading Day

Monday, December 21 5:00-7:00
FINAL EXAM
Cumulative
. Review.sheet for chapters 32-34 and 16-19
For the rest of the material use review sheets for examinations 1-3.                                                    

GRADES
Your lecture grade will be based on the following:  Weekly quizzes - 20% and the three examinations and the final exam - 80%.
Your quiz and test grades for lecture may be accessed on your Moodle  account for this class.
Your lecture grade accounts for 50% of your final course grade. Your laboratory grade accounts for the other 50%.
You must get a passing grade in both the lecture and the lab portions of the course in order to receive a passing grade for the course no matter what the combined average is.  For example if you get a 40 in lab and an 80 in lecture you will fail the course even though your overall average  is 60.  This is a policy of the Biology Convening Group and applies to all required biology courses with a lab.
 
A
A-
B+
B
B-
C+
C
C-
D+
D
F
94-100
90-93
87-89
83-86
80-82
75-79
70-74
66-69
61-65
55-60
<55

QUIZZES - There will be a ten minute quiz at the beginning of each Wednesday lecture. The quizzes will cover the material given in the two previous lectures and the reading materials assigned. They are designed to: 1) reassure you that you understand the material 2) see that you are rewarded for keeping up-to-date and 3) uncover any problem areas. There will be no make-ups on quizzes, but the two lowest quiz scores will be dropped.

EXAMS - There will be four cumulative examinations including the final exam. These four exams are equally weighted. There are samples of  past examinations on my web site. There will be a cumulative, primarily fill-in-the-blank make-up exam for anyone who has had to miss any lecture examination for whatever reason (illness, funeral, job interview, etc.) the week of  December 1st. The make-up exam may also be taken by anyone who has not missed an exam, but who has earned a poor grade on a previous exam and wishes to exchange the make-up exam grade (if it is higher).  No special time accommodations will be made for students taking the exam for the purpose of getting a higher grade.  The make-up will cover all material through the first three exams. Remember that fill-in-the-blank exams are difficult for some students (either you know the answer or you don’t) so try not to miss the regularly scheduled exams..

Studying for this course
You should spend a minimum of two hours out of class for one hour in class. That means six hours minimum a week outside of class studying for the lecture.

  DISABILITY ACCOMMODATIONS - If you need course adaptations or accommodations because of a documented disability, please make an appointment with me as soon as possible in the semester to discuss your needs.

Suppose things in this course are not going as well as you would like:

    "He who asks is a fool for five minutes, but he who does not ask remains a fool forever" - Chinese proverb
 
 

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